s

CMakeLists.txt

@@ -8,11 +8,7 @@ set(CMAKE_CXX_STANDARD_REQUIRED True)
 # set(CMAKE_VERBOSE_MAKEFILE ON)
 add_compile_options(-ggdb)
 
-include_directories(
-  external/include
-  shared/inc
-)
-
+include_directories(external/include/)
 link_libraries(
   ${CMAKE_SOURCE_DIR}/external/libimgui.a
   ${CMAKE_SOURCE_DIR}/external/libraylib.a
@@ -22,7 +18,11 @@ link_libraries(
   m
 )
 
-add_library(shared STATIC
+add_executable(app
+  app/src/main.cpp
+  app/src/App.cpp
+  app/src/DnaStore.cpp
+  app/src/sys.cpp
   shared/src/canvas/BackGround.cpp
   shared/src/canvas/BackGroundColors.cpp
   shared/src/canvas/Canvas.cpp
@@ -32,33 +32,36 @@ add_library(shared STATIC
   shared/src/values/mrand.cpp
   shared/src/values/Similarity.cpp
   shared/src/TcpSocket.cpp
-  shared/src/sql.cpp
 )
-
-add_executable(app
-  app/src/main.cpp
-  app/src/App.cpp
-  app/src/DnaStore.cpp
-  app/src/sys.cpp
-)
-target_include_directories(app PRIVATE app/inc)
-target_link_libraries(app PRIVATE shared)
+# Add include directories
+target_include_directories(app PRIVATE app/inc shared/inc )
 
 add_executable(server
   server/src/server.cpp
   server/src/checker.cpp
+
+  shared/src/sql.cpp
+  shared/src/TcpSocket.cpp
+  shared/src/values/Dna.cpp
+  shared/src/values/DnaManager.cpp
+  shared/src/values/mrand.cpp
 )
-target_include_directories(server PRIVATE server/inc)
-target_link_libraries(server PRIVATE shared)
+# Add include directories
+target_include_directories(server PRIVATE server/inc shared/inc)
 
 add_executable(view
   view/src/main.cpp
   view/src/Vapp.cpp
-)
-target_include_directories(view PRIVATE view/inc)
-target_link_libraries(view PRIVATE shared)
+  shared/src/canvas/BackGround.cpp
+  shared/src/canvas/BackGroundColors.cpp
+  shared/src/canvas/Canvas.cpp
+  shared/src/canvas/Tree.cpp
+  shared/src/values/Dna.cpp
+  shared/src/values/DnaManager.cpp
+  shared/src/values/mrand.cpp
+  shared/src/values/Similarity.cpp
   
-add_executable(slike
-  random/slike.cpp
+  shared/src/sql.cpp
 )
-target_link_libraries(slike PRIVATE shared)
+# Add include directories
+target_include_directories(view PRIVATE view/inc shared/inc)

random/slike.cpp

@@ -1,147 +0,0 @@
-#include <raylib.h>
-#include <raymath.h>
-#include <cmath>
-#include <vector>
-
-Vector2 newPoint(Vector2 start, float len, float angleD){
-  float angleR = (angleD * PI) / 180; // radian
-  return {start.x + len * cos(angleR), start.y - len * sin(angleR)};
-}
-
-void drawBranch(Vector2 startV, Vector2 endV, Color startC, Color endC, int startR, int endR){
-  float fstep = 0.05;
-  for (float i = 0; i < 1.05; i += fstep)
-  {
-    Vector2 point = Vector2Lerp(startV, endV, i);
-    Color color = ColorLerp(startC, endC, i);
-    int size = Lerp(startR, endR, i);
-    DrawCircleV(point, size, color);
-  }
-}
-
-constexpr float screenWidth = 800;
-constexpr float screenHeight = 800;
-
-constexpr float len = 300;
-constexpr float angleD = 100;
-constexpr Vector2 start = {screenWidth / 2, screenHeight - 100};
-constexpr float radius = 20;
-constexpr float radiusS = 80;
-constexpr float radiusE = 60;
-constexpr Color colorS = RED;
-constexpr Color colorE = GREEN;
-
-typedef void (*slika)();
-
-int idx = 0;
-
-std::vector<slika> v_slik = {
-    []()
-    {
-      DrawCircleV(start, radius, BLACK);
-    },
-
-    []()
-    {
-      Vector2 end = {start.x, start.y - len};
-      DrawCircleV(start, radius, BLACK);
-      DrawLineEx(start, end, 10, BLACK);
-    },
-
-    []()
-    {
-      Vector2 end = newPoint(start, len, angleD);
-      DrawCircleV(start, radius, BLACK);
-      DrawLineEx(start, end, 10, BLACK);
-      DrawCircleV(end, radius, BLACK);
-      DrawCircleSectorLines(start, len / 3, 360 - angleD, 360, 30, BLACK);
-    },
-
-    []()
-    {
-      Vector2 end = newPoint(start, len, angleD);
-      DrawCircleV(start, radius, BLACK);
-      DrawLineEx(start, end, 10, BLACK);
-      DrawCircleV(end, radius, BLACK);
-      DrawCircleLinesV(start, radiusS, BLACK);
-      DrawCircleLinesV(end, radiusE, BLACK);
-    },
-
-    []()
-    {
-      Vector2 end = newPoint(start, len, angleD);
-      DrawLineEx(start, end, 10, BLACK);
-      DrawCircleV(start, radiusS, colorS);
-      DrawCircleV(end, radiusE, colorE);
-    },
-
-    []()
-    {
-      Vector2 end = newPoint(start, len, angleD);
-      drawBranch(start, end, colorS, colorE, radiusS, radiusE);
-    },
-
-    []()
-    {
-      Vector2 p = newPoint(start, len, angleD);
-      drawBranch(start, p, colorS, colorE, radiusS, radiusE);
-      Vector2 p1 = newPoint(p, len, 135);
-      Vector2 p2 = newPoint(p, len, 90);
-      Vector2 p3 = newPoint(p, len, 45);
-      DrawLineEx(p, p1, 10, BLACK);
-      DrawLineEx(p, p2, 10, BLACK);
-      DrawLineEx(p, p3, 10, BLACK);
-      DrawCircleV(p, radius, BLACK);
-      DrawCircleV(p1, radius, BLACK);
-      DrawCircleV(p2, radius, BLACK);
-      DrawCircleV(p3, radius, BLACK);
-    },
-
-    []()
-    {
-      Vector2 p = newPoint(start, len, angleD);
-      drawBranch(start, p, colorS, colorE, radiusS, radiusE);
-      Vector2 p1 = newPoint(p, len, 135);
-      Vector2 p2 = newPoint(p, len, 90);
-      Vector2 p3 = newPoint(p, len, 45);
-      drawBranch(p, p1, colorE, BLUE, radiusE, 50);
-      drawBranch(p, p2, colorE, ORANGE, radiusE, 50);
-      drawBranch(p, p3, colorE, PURPLE, radiusE, 50);
-    },
-
-  };
-
-int main(int argc, char *argv[])
-{
-  InitWindow(screenWidth, screenHeight, "Slike");
-  SetTargetFPS(60);
-
-  while (!WindowShouldClose())
-  {
-    BeginDrawing();
-    if (IsKeyPressed(KEY_S))
-    {
-      TakeScreenshot(TextFormat("slika%.2d.png", idx));
-    }
-    if (IsKeyPressed(KEY_N))
-    {
-      idx++;
-      if (idx >= v_slik.size())
-        idx = v_slik.size() - 1;
-    }
-    if (IsKeyPressed(KEY_P))
-    {
-      idx--;
-      if (idx < 0)
-        idx = 0;
-    }
-    ClearBackground(WHITE);
-    v_slik[idx]();
-  
-    EndDrawing();
-  }
-
-
-  CloseWindow();
-  return 0;
-}

shared/inc/canvas/Tree.hpp

@@ -32,9 +32,8 @@ private:
   Vector2 start = {0};
   std::list<DrawArgs> drawCalls;
 
-  void calculateBranch();
+  void drawBranch();
 
-  void drawBranch(Vector2 startPoint, Vector2 endPoint, Color startColor, Color endColor, float startThickness, float endThickness);
   inline size_t getNumOfBranches(int dep);
   inline Color getStartColor(DrawArgs &arg);
   inline Color getEndColor(int dep, Color &start);

shared/inc/values/Similarity.hpp

@@ -4,7 +4,7 @@
 namespace Similarity
 {
   float euclidean_distance(Dna *d1, Dna *d2);// direct distance betwen vector. wont give 0 and 1
-  float dot_minmax(Dna *d1, Dna *d2); // doent return betwen 0 to 1
+  // float dot_product(Dna *d1, Dna *d2); // doent return betwen 0 to 1
   float cosine_similarity(Dna *d1, Dna *d2);
   float cosine_similarity_int(Dna *d1, Dna *d2);
   float hamming_distance(Dna *d1, Dna *d2);

shared/src/canvas/BackGround.cpp

@@ -1,5 +1,4 @@
 #include <cmath>
-#include  <algorithm>
 
 #include "canvas/BackGround.hpp"
 #include "canvas/BackGroundColors.hpp"

shared/src/canvas/Tree.cpp

@@ -4,7 +4,6 @@
 
 #include <raylib.h>
 #include <raymath.h>
-#include <rlgl.h>
 
 #define ITER_PER_FRAME 5000
 
@@ -57,7 +56,7 @@ bool Tree::tick()
   size_t i = 0;
   while (!drawCalls.empty())
   {
-    calculateBranch();
+    drawBranch();
     drawCalls.pop_front();
     i++;
     if (i >= ITER_PER_FRAME)
@@ -69,7 +68,7 @@ bool Tree::tick()
 
 // Private
 
-void Tree::calculateBranch()
+void Tree::drawBranch()
 {
   DrawArgs arg = drawCalls.front();
   if (arg.dep == MAX_DEPTH)
@@ -87,7 +86,7 @@ void Tree::calculateBranch()
 
   Color colorStart = getStartColor(arg);
   Color colorEnd = getEndColor(arg.dep, colorStart);
-  // drawBranch(arg.start, end, colorStart, colorEnd, sizeStart, sizeEnd);
+
   for (float i = 0; i < 1; i += fstep)
   {
     Vector2 point = Vector2Lerp(arg.start, end, i);
@@ -95,6 +94,9 @@ void Tree::calculateBranch()
     int size = Lerp(sizeStart, sizeEnd, i);
     DrawCircleV(point, size, color);
     //DrawTextureEx(texBunny, point,0, ((float)size) / texBunny.height, color);
+   
+    // use
+    // DrawRectangleGradientEx
   }
 
   // add more branches to draw
@@ -198,51 +200,3 @@ inline float Tree::getAngleVar(DrawArgs &arg)
 
   return angleVar;
 }
-
-void Tree::drawBranch(Vector2 startPoint, Vector2 endPoint, Color startColor, Color endColor, float startThickness, float endThickness)
-{
-  // Calculate the direction vector from startPoint to endPoint
-  Vector2 direction = {endPoint.x - startPoint.x, endPoint.y - startPoint.y};
-
-  // Normalize the direction vector
-  float length = sqrtf(direction.x * direction.x + direction.y * direction.y);
-  if (length == 0)
-    length = 1; // Avoid division by zero
-  Vector2 normalizedDir = {direction.x / length, direction.y / length};
-
-  // Calculate the perpendicular vector (rotate 90 degrees)
-  Vector2 perpendicular = {-normalizedDir.y, normalizedDir.x};
-
-  // Calculate the four vertices of the quadrilateral
-  Vector2 topLeft = {
-      startPoint.x + perpendicular.x * startThickness,
-      startPoint.y + perpendicular.y * startThickness};
-  Vector2 topRight = {
-      endPoint.x + perpendicular.x * endThickness,
-      endPoint.y + perpendicular.y * endThickness};
-  Vector2 bottomLeft = {
-      startPoint.x - perpendicular.x * startThickness,
-      startPoint.y - perpendicular.y * startThickness};
-  Vector2 bottomRight = {
-      endPoint.x - perpendicular.x * endThickness,
-      endPoint.y - perpendicular.y * endThickness};
-
-  // Draw the two triangles to form the quadrilateral
-  rlBegin(RL_TRIANGLES);
-  // First triangle
-  rlColor4ub(startColor.r, startColor.g, startColor.b, startColor.a);
-  rlVertex2f(topLeft.x, topLeft.y);
-  rlColor4ub(endColor.r, endColor.g, endColor.b, endColor.a);
-  rlVertex2f(topRight.x, topRight.y);
-  rlColor4ub(startColor.r, startColor.g, startColor.b, startColor.a);
-  rlVertex2f(bottomLeft.x, bottomLeft.y);
-
-  // Second triangle
-  rlColor4ub(startColor.r, startColor.g, startColor.b, startColor.a);
-  rlVertex2f(bottomLeft.x, bottomLeft.y);
-  rlColor4ub(endColor.r, endColor.g, endColor.b, endColor.a);
-  rlVertex2f(topRight.x, topRight.y);
-  rlColor4ub(endColor.r, endColor.g, endColor.b, endColor.a);
-  rlVertex2f(bottomRight.x, bottomRight.y);
-  rlEnd();
-}

shared/src/values/Similarity.cpp

@@ -2,26 +2,10 @@
 #include <cmath>
 #include <algorithm>
 #include <numeric>
-#include <raylib.h>
-#include <chrono>
 
 namespace Similarity
 {
 
-  float dot_minmax(Dna *d1, Dna *d2)
-  {
-    uint64_t max = sizeof(Dna) * 255 * 255;
-    uint8_t *a = (uint8_t *)d1;
-    uint8_t *b = (uint8_t *)d2;
-    uint32_t result = 0;
-    for (size_t i = 0; i < sizeof(Dna); ++i)
-    {
-      result += static_cast<uint32_t>(a[i]) * static_cast<uint32_t>(b[i]);
-    }
-
-    return result / (double)max;
-  }
-
   float euclidean_distance(Dna *d1, Dna *d2)
   {
     uint8_t *a = (uint8_t *)d1;
@@ -116,45 +100,8 @@ namespace Similarity
     return 1 - (distance / (end - start));
   }
 
-  const char *nameofFunc(simil_func f)
-  {
-    if (f == &Similarity::euclidean_distance)
-    {
-      return "eucl";
-    }
-    else if (f == &Similarity::dot_minmax)
-    {
-      return "dot";
-    }
-    else if (f == &Similarity::cosine_similarity)
-    {
-      return "cos";
-    }
-    else if (f == &Similarity::cosine_similarity_int)
-    {
-      return "cos_i";
-    }
-    else if (f == &Similarity::hamming_distance)
-    {
-      return "hamming_distance";
-    }
-    else if (f == &Similarity::hamming_distance_without_seeds)
-    {
-      return "hamming_distance_without_seeds";
-    }
-    else if (f == &Similarity::levenshtein_distance)
-    {
-      return "leven";
-    }
-    else
-    {
-      return "unknown nameofFunc";
-    }
-  }
-
   float calc_similarity(std::vector<Dna> &vec, simil_func f)
   {
-    auto start = std::chrono::high_resolution_clock::now();
     size_t num_pairs = (vec.size() * (vec.size() - 1)) / 2;
 
     float total_similarity = 0.0;
@@ -166,11 +113,6 @@ namespace Similarity
       }
     }
     float average_similarity = total_similarity / num_pairs;
-
-    auto stop = std::chrono::high_resolution_clock::now();
-    
-    const auto int_ms = std::chrono::duration_cast<std::chrono::microseconds>(stop - start);
- 
     return average_similarity * 100.0f;
   }
 
@@ -181,7 +123,7 @@ namespace Similarity
     uint8_t *b = (uint8_t *)d2;
 
     // Create a distance matrix
-    static std::vector<std::vector<uint32_t>> dp(len + 1, std::vector<uint32_t>(len + 1, 0));
+    std::vector<std::vector<uint32_t>> dp(len + 1, std::vector<uint32_t>(len + 1, 0));
 
     // Initialize the first row and column
     for (size_t i = 0; i <= len; ++i)

tmp.txt

@@ -1,14 +0,0 @@
-eucl	cos	cos_i	hamming	dot	leven
-91	117	181	87	41	105799
-60	78	305	250	40	100331
-61	78	121	105	40	97438
-66	81	124	106	40	97529
-60	78	127	108	40	96296
-62	85	131	104	39	96456
-61	81	125	106	40	96510
-61	81	125	103	40	97253
-61	81	125	78	40	97409
-60	82	125	103	40	99816
-62	81	128	81	40	98978
-68	81	126	58	40	98289
-61	88	130	60	39	99663

view/inc/Vapp.hpp

@@ -28,7 +28,6 @@ public:
 private:
   bool showSelection;
   bool showStats;
-  bool saveToFile;
   sqlite3 *db;
   sqlite3_stmt *get_gen_num;
   std::vector<int64_t> ids;

view/src/Vapp.cpp

@@ -105,12 +105,12 @@ void Vapp::update()
     simil[1] = Similarity::calc_similarity(manager.vector, Similarity::cosine_similarity);
     simil[2] = Similarity::calc_similarity(manager.vector, Similarity::cosine_similarity_int);
     simil[3] = Similarity::calc_similarity(manager.vector, Similarity::hamming_distance);
-    simil[4] = Similarity::calc_similarity(manager.vector, Similarity::levenshtein_distance);
-    simil[5] = Similarity::calc_similarity(manager.vector, Similarity::dot_minmax);
+    simil[4] = Similarity::calc_similarity(manager.vector, Similarity::hamming_distance_without_seeds);
+    simil[5] = Similarity::calc_similarity(manager.vector, Similarity::levenshtein_distance);
     stageOfDrawing = DrawingStage::save;
     break;
   case DrawingStage::save:
-    if(saveToFile) drawToFile();
+    drawToFile();
     stageOfDrawing = DrawingStage::done;
     break;
   case DrawingStage::done:
@@ -140,10 +140,6 @@ void Vapp::draw()
     {
       setUpTable();
     }
-    if(ImGui::MenuItem("Save to File", nullptr, saveToFile, true))
-    {
-      saveToFile = !saveToFile;
-    }
     ImGui::EndMainMenuBar();
   }
 
@@ -189,8 +185,8 @@ void Vapp::draw()
     ImGui::LabelText("##sim2", "cosine_similarity: %f", simil[1]);
     ImGui::LabelText("##sim3", "cosine_similarity_int: %f", simil[2]);
     ImGui::LabelText("##sim4", "hamming_distance: %f", simil[3]);
-    ImGui::LabelText("##sim5", "levenshtein_distance: %f", simil[4]);
-    ImGui::LabelText("##sim6", "dot_minmax: %f", simil[5]);
+    ImGui::LabelText("##sim5", "hamming_distance_without_seeds: %f", simil[4]);
+    ImGui::LabelText("##sim6", "levenshtein_distance: %f", simil[5]);
 
     const ImGuiTableFlags flags = ImGuiTableFlags_NoHostExtendX | ImGuiTableFlags_SizingFixedFit | ImGuiTableFlags_Resizable | ImGuiTableFlags_BordersOuter | ImGuiTableFlags_BordersV | ImGuiTableFlags_ContextMenuInBody;
     const int columns = numberOfFunc + 1;
@@ -210,9 +206,9 @@ void Vapp::draw()
       ImGui::TableSetColumnIndex(4);
       ImGui::Text("hamming_distance");
       ImGui::TableSetColumnIndex(5);
-      ImGui::Text("levenshtein_distance");
+      ImGui::Text("hamming_distance_without_seeds");
       ImGui::TableSetColumnIndex(6);
-      ImGui::Text("dot_minmax");
+      ImGui::Text("levenshtein_distance");
 
       for (int row = 0; row < similTable.size(); row++)
       {
@@ -329,8 +325,8 @@ void Vapp::setUpTable()
       similTable[s][1] = Similarity::calc_similarity(manager.vector, Similarity::cosine_similarity);
       similTable[s][2] = Similarity::calc_similarity(manager.vector, Similarity::cosine_similarity_int);
       similTable[s][3] = Similarity::calc_similarity(manager.vector, Similarity::hamming_distance);
-      similTable[s][4] = Similarity::calc_similarity(manager.vector, Similarity::levenshtein_distance);
-      similTable[s][5] = Similarity::calc_similarity(manager.vector, Similarity::dot_minmax);
+      similTable[s][4] = Similarity::calc_similarity(manager.vector, Similarity::hamming_distance_without_seeds);
+      similTable[s][5] = Similarity::calc_similarity(manager.vector, Similarity::levenshtein_distance);
       DnaManager::newGen(&manager);
     }
     else
@@ -339,13 +335,13 @@ void Vapp::setUpTable()
     }
 
     sql::reset(get_gen_stmt);
-    if(saveToFile)
-    {
+
     int64_t id = ids[selected_id_index];
-      const char* buff = TextFormat("%ld.txt", id);
+    char buff[50];
+    sprintf(buff, "%ld.txt", id);
     std::ofstream file(buff);
 
-      file << "| index | euclidean_distance | cosine_similarity | cosine_similarity_int | hamming_distance | levenshtein_distance | dot_minmax |\n";
+  file << "| index | euclidean_distance | cosine_similarity | cosine_similarity_int | hamming_distance | hamming_distance_without_seeds | levenshtein_distance |\n";
   file << "| ---   | ---                | ---               | ---                   | ---              | ---                            | ---                  |\n";
 
 
@@ -360,7 +356,6 @@ void Vapp::setUpTable()
       file << "\n";
     }
   }
- }
 
   sql::finalize(get_gen_stmt);
 }