16 lines
639 B
C++
16 lines
639 B
C++
#include "DnaManager.hpp"
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#include <vector>
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namespace Similarity
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{
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// float euclidean_distance(Dna *d1, Dna *d2); direct distance betwen vector. wont give 0 and 1
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// float dot_product(Dna *d1, Dna *d2); doent return betwen 0 to 1
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float cosine_similarity(Dna *d1, Dna *d2);
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float hamming_distance(Dna *d1, Dna *d2);
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float jaccard_index(Dna *d1, Dna *d2);
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float levenshtein_distance(Dna *d1, Dna *d2);
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// float needleman_wunsch(Dna *d1, Dna *d2); used for bioinformatics and aligment. Dont need its aligned alredy
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typedef float(simil_func)(Dna *d1, Dna *d2);
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float calc_similarity(std::vector<Dna> &vec, simil_func f);
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} |